Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq13424 104 2e-17 >seq13424 Length=872 Score = 104 bits (114), Expect = 2e-17 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||||||||| |||| ||| ||||| || | |||||||| ||||| ||||||||||| Sbjct 279 ACCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATC-AG 337 Query 118571 CATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 || |||| ||| |||||| || ||||| || || |||| || ||||| || || || Sbjct 338 CA-AGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGG 396 Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || || || ||||| || ||| || ||| || | || | ||||||| |||| Sbjct 397 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCG 456 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 || || | ||| | ||||| || |||||| Sbjct 457 ACTTCCAAGGTGATGGTTTTACCAGTCAGA 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433700993136700