Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq13424 82.4 6e-11 >seq13424 Length=872 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||| ||||| | || |||| || | |||||||||||||| || |||||||| || Sbjct 280 CCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 339 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | |||||||| |||||||| ||| | || |||| ||| || || ||| Sbjct 340 AGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGA 399 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || || || ||| || ||| || | | | | || || || ||| | Sbjct 400 ATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGACT 459 Query 18995 TCGACGGTAATGGTTTTACCTGT 19017 || | ||| ||||||||||| || Sbjct 460 TCCAAGGTGATGGTTTTACCAGT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414449137468150