Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq13424 129 5e-25 >seq13424 Length=872 Score = 129 bits (142), Expect = 5e-25 Identities = 156/209 (75%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | ||||||||| ||||| || | |||||| |||||||| | ||| ||||| | Sbjct 280 CCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAG-C 338 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | |||||| | ||||||||| ||||| ||| ||||||||| || || || || || | Sbjct 339 A-AGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGG 397 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||||||||| || || | ||| || || |||||| | | | ||||| | |||| Sbjct 398 GAATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGA 457 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGA 94987 | || | ||||||||||| ||||| ||| Sbjct 458 CTTCCAAGGTGATGGTTTTACCAGTCAGA 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448154050911000