Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq7295 107 3e-18 >seq7295 Length=5679 Score = 107 bits (118), Expect = 3e-18 Identities = 151/210 (72%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 193961 TCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATC 194020 |||| | ||||||||| |||| || ||||| ||||||||||| |||| || | | Sbjct 4118 TCACCAGTCTCCAAGACGAGGAAGAACTTTTGTGACTCGTAAGATCACACGAGCAGTGGC 4059 Query 194021 TAAGATCTCTGTTGGATTACAGAAGATT--CTTTATCTTGGTAATCTTAATGCTAAGAGG 194078 | ||||| | || || || | || ||||| || || ||| | || || || Sbjct 4058 TGAGATCAGCTTAGGTTTTCA--ATCTTGCCTTTACCTCGGAAATTTATCAGCCAAAAGA 4001 Query 194079 GATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAA 194138 ||||||||||| || || ||||||||||||| |||||| |||||| ||||| |||| | Sbjct 4000 GATTGGGGACATGCCAAAGATTATGTTGAAGGCATGTGGAGAATGTTACAACAAGATGTA 3941 Query 194139 CCCGATGATTATGTGATTGCTACAGGTGAA 194168 | || || ||||| | ||||| |||||| Sbjct 3940 GCAGAAGACTATGTTTTAGCTACCGGTGAA 3911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807308138581000