Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq12187 84.2 3e-11 >seq12187 Length=3801 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 |||||||| |||||||||||||| | |||||| || || |||||| | | || ||||| Sbjct 2150 TGAATTCCAACTGCGACACGCATGAGCATGTGTTGTGGCCTTTCAGCAACTTTATTGTTG 2091 Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679 || ||| | ||||||| ||| | || || || ||||| |||||||| ||||| Sbjct 2090 ATACGCAAGAGGTAGGATCGTTCAAGCGTCTTGAAGCCAAAGTAGTTGTAGTTGAAGTCA 2031 Query 63680 CGTTCGTAAAT 63690 || || || || Sbjct 2030 CGGTCATAGAT 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633438148210000