Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq13424 113 4e-20 >seq13424 Length=872 Score = 113 bits (124), Expect = 4e-20 Identities = 141/191 (74%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGA----GTCACTG 25076 |||| |||||| ||||||| | ||||| ||||| || ||||| || || |||| Sbjct 484 TGACTGGTAAAACCATCACCTTGGAAGTCGAGTCTTCGGACACAATTGACAACGTCA--- 428 Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136 |||| || | ||| || || ||||| ||||| |||||||||||||| | || |||||| Sbjct 427 AAGCCAAGATTCAG-GATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCC 369 Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196 || |||||| | || |||| || || | | |||||||| || ||||| || || || Sbjct 368 GGTAAACAACTGGAGGATGGACGAACACTTGCTGATTACAACATCCAAAAGGAGTCTACT 309 Query 25197 CTACATTTAGT 25207 || ||||| || Sbjct 308 CTTCATTTGGT 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433198742997125