Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq14135 100 6e-16 >seq14135 Length=6545 Score = 100 bits (110), Expect = 6e-16 Identities = 158/225 (70%), Gaps = 1/225 (0%) Strand=Plus/Minus Query 279691 TGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTC 279750 ||||| | || || || || ||||||||||||||||| || ||||| | || || |||| Sbjct 2128 TGCCATT-GGATCACTCTCTGGTGGTTGGAAGATGAAACTTGCCCTTGCCCGGGCAATTC 2070 Query 279751 TACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACG 279810 | | |||||| || | |||||||||||||| |||||||| |||| ||||| Sbjct 2069 TTTTCAAGGCCGATATCTTGCTGCTTGATGAGCCTACCAACCATTTGGATGTGCTCAACG 2010 Query 279811 TAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTC 279870 | ||||| || |||| | | ||| ||| | | | || |||| ||||||| Sbjct 2009 TTCAATGGCTGATGGACTACTTGAAATCTCTTGAGACTTGTACCTCGATCATCGTCTCTC 1950 Query 279871 ACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACT 279915 ||||||| |||||||| || || || | | |||||| |||| Sbjct 1949 ACGACTCAGGCTTCCTGGACAATGTTTGTACCGACATCATCCACT 1905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027514484833475