Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq13424 109 5e-19 >seq13424 Length=872 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || || | || ||| || ||||| | ||||| || ||||| ||||||||||| Sbjct 279 ACCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGC 338 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||| || ||||||||||| || |||| || ||||||||||| || || Sbjct 339 AAGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGG 398 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || |||||| ||| | | |||| ||||| | || ||||| Sbjct 399 AATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGAC 458 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGA 114362 |||| ||| | ||||| || |||||| Sbjct 459 TTCCAAGGTGATGGTTTTACCAGTCAGA 486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||||| | | || | ||| | || ||||| || || ||||||||||| Sbjct 564 ATTCCACCACGTAAACGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCC 623 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| || || ||||| || ||||| |||| | ||| ||||| || || Sbjct 624 GCGAGTGTGCGACCGTCCTCCAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGC 683 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||| || || | | |||| ||||||| ||||||| Sbjct 684 GGGATACCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCAATAGTGTCGGAGGATTCG 743 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAG 114361 || |||| || | |||||||| ||||| Sbjct 744 ACTTCCAGTGTGATTGTTTTGCCAGTCAG 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420009078503700