Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7295 87.8 4e-12 >seq7295 Length=5679 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 68398 GAATTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGG 68457 || ||| ||||| ||| | ||||| | ||||| |||||| |||| |||||| || | Sbjct 4495 GATTTTATCAAGCTTCTACTTCAGAACTTTATGGTAAAGTGGTCGAAACTCCTCAAACTG 4436 Query 68458 AAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAA 68500 |||| ||||| || ||||||||||| || || ||||||||||| Sbjct 4435 AAAAAACTCCTTTCTATCCTCGAAGTCCCTATGGTGTTGCAAA 4393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102534152341250