Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq13424 98.7 7e-16 >seq13424 Length=872 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || ||||||| || || |||||||| ||||| || ||||| ||||||||||| Sbjct 280 CCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 339 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | || || | |||||| || || | || | ||||||||||| ||| Sbjct 340 AGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGA 399 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || ||| ||| ||| || | || || || || | || || Sbjct 400 ATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGACT 459 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGA 15156 || ||||| ||||||||||| |||||| Sbjct 460 TCCAAGGTGATGGTTTTACCAGTCAGA 486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357285393875375