Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq12880 129 7e-25 >seq12880 Length=5491 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 157933 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 157992 |||||||| || ||| ||||||||| |||||||||||| || |||| |||||||| Sbjct 4084 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTACCAGCCTGAAATATCTCAA 4025 Query 157993 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCG 158052 || |||||||| |||| |||||||||||||| | || | |||||||| |||| Sbjct 4024 GGCAGATTGGAGTCTTTGATCAATTACCAAACGATGATAAGCTCGCTCACAGGCTTACCA 3965 Query 158053 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || | || ||||| ||||||| || |||||||| || || ||||| ||| Sbjct 3964 ATTTCTAATGCATCATTATTAGACGAGGCAACTGCTGCTGCTGAAGCTATG 3914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587871293086000