Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq13424 93.3 3e-14 >seq13424 Length=872 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| |||||||| || || ||| ||||| || |||||||||| || |||| | Sbjct 292 CGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGTCCA 351 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||| || ||||||||||| || ||||||||||| || | ||||| || ||||| Sbjct 352 TCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGAATACCTTCCTTA 411 Query 48672 TCGCTAATCTT 48682 || |||||| Sbjct 412 TCCTGAATCTT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380823970480425