Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq12187 86.0 1e-11 >seq12187 Length=3801 Score = 86.0 bits (94), Expect = 1e-11 Identities = 126/178 (71%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 213805 CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGG 213864 ||||| ||||||||||| || | || || | ||| |||||| ||| ||||| | | Sbjct 2780 CATCTTCCACTCTCTGCATAAATAAATCTGGAATCCATAGCGCGTAGAAAAGGTCACGCG 2721 Query 213865 TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGT 213924 || || || ||| ||| ||||| || ||||| || | ||||| | ||| |||| Sbjct 2720 CTCTACTTTCTTCCTTTCCGTGATTTTTACGTAGATCGAGCCAATCAAATACGTCTGCGT 2661 Query 213925 GCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCAC 213979 |||| ||||| ||||| || ||||| || || || || ||| || || ||||| || Sbjct 2660 GCCATGGCTCAATGTATATCGCAAAAGCACCTGGTCTTTTGTTCCCACCTTGGTCAAC 2603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931247809184000