Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq12187 127 1e-24 >seq12187 Length=3801 Score = 127 bits (140), Expect = 1e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| ||| ||||||||||||||||||||| | || || || | || | |||||| Sbjct 2775 TCCACTCTCTGCATAAATAAATCTGGAATCCATAGCGCGTAGAAAAGGTCACGCGCTCTA 2716 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 ||||||| ||||||||||| || |||||| | ||||||| | |||| ||||||| Sbjct 2715 CTTTCTTCCTTTCCGTGATTTTTACGTAGATCGAGCCAATCAAATACGTCTGCGTGCCAT 2656 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || || | || || |||||| |||| |||||| |||||||| || |||||||| Sbjct 2655 GGCTCAATGTATATCGCAAAAGCACCTGGTCTTTTGTTCCCACCTTGGTCAACGTATCTA 2596 Query 26102 GCAGT 26106 || || Sbjct 2595 GCGGT 2591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252964520935625