Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq12880 129 7e-25 >seq12880 Length=5491 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || |||||||| || ||||||| ||||| || | |||||||| || Sbjct 3914 CATAGCTTCAGCAGCAGCAGTTGCCTCGTCTAATAATGATGCATTAGAAATTGGTAAGCC 3973 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || | || | |||||||||||||| |||| |||||||| || |||||||| Sbjct 3974 TGTGAGCGAGCTTATCATCGTTTGGTAATTGATCAAAGACTCCAATCTGCCTTGAGATAT 4033 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAAC 140029 |||| || |||||||||||| ||||||||| ||| || |||||||| Sbjct 4034 TTCAGGCTGGTAGGGAGTGTAACTCGTGTACCAAGCAGGGTTTTCAAGAAC 4084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578821262677000