Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13424 113 8e-20 >seq13424 Length=872 Score = 113 bits (124), Expect = 8e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 171854 TCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTC 171913 ||| ||||| ||||| | ||||| ||| || || || ||||| | | | |||| | Sbjct 291 TCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGTCC 350 Query 171914 GTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTT 171973 || |||| ||||||||| ||||| |||| || |||||||||||| || || ||||| || Sbjct 351 ATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGAATACCTTCCTT 410 Query 171974 ATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAAT 172033 ||| || || || ||| || || || || || || || || ||||| | || || Sbjct 411 ATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGACTTCCAAGGTGAT 470 Query 172034 GGTTTTACCAGT 172045 |||||||||||| Sbjct 471 GGTTTTACCAGT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904859084955000