Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq13424 127 2e-24 >seq13424 Length=872 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || || |||||||| || || | ||||| || | | |||||| | || | || ||| Sbjct 485 CTGACTGGTAAAACCATCACCTTGGAAGTCGAGTCTTCGGACACAATTGACAACGTCAAA 426 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 ||||| || || || ||||| || || || || ||||| || | ||||||||||| Sbjct 425 GCCAAGATTCAGGATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCCGGT 366 Query 24845 AAACAGCTGGAGGATTCGAGAA-ACATGTCAGATTATAACATTCAAAAGGAATCGACACT 24903 ||||| ||||||||| ||| || || | ||||| ||||| |||||||| || || || Sbjct 365 AAACAACTGGAGGATGGACGAACACTTG-CTGATTACAACATCCAAAAGGAGTCTACTCT 307 Query 24904 ACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||| ||||||||||||||||| Sbjct 306 TCATTTGGTATTGCGATTGCGCGGAGG 280 Score = 104 bits (114), Expect = 2e-17 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || || || ||||| || || || ||||| ||| || ||||||| | || | || || Sbjct 772 CTGACTGGCAAAACAATCACACTGGAAGTCGAATCCTCCGACACTATTGACAATGTCAAG 713 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 || || || ||||| ||||| || || || ||||||||||||||||||||||| || Sbjct 712 GCCAAAATTCAGGACAAGGAAGGTATCCCGCCAGATCAACAACGTTTGATCTTTGCTGGA 653 Query 24845 AAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACAC 24902 || || |||||||| ||| | || | | ||||| ||||| || |||||||| || | Sbjct 652 AAGCAACTGGAGGACGGTCG-CACAC-TCGCGGATTACAACATCCAGAAGGAATCAACCC 595 Query 24903 TACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || | ||| | || || || || || Sbjct 594 TCCATCTTGTGCTCCGTTTACGTGGTGG 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449759959453000