Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13424 87.8 1e-12 >seq13424 Length=872 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 110297 ACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAG 110356 || || |||||||| ||| | ||| ||| || || || | | | | || ||| Sbjct 482 ACTGGTAAAACCATCACCTTGGAAGTCGAGTCTTCGGACACAATTGACAACGTCAAAGCC 423 Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| || || ||||| | ||| || ||||| |||| || | ||| |||||| Sbjct 422 AAGATTCAGGATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCCGGTAAA 363 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476 || |||||||||| ||||| | || ||||||||||| ||||| || ||||| | || Sbjct 362 CAACTGGAGGATGGACGAACACTTGCTGATTACAACATCCAAAAGGAGTCTACTCTTCAT 303 Query 110477 ATGGTGTTAAGACTGCGAggggg 110499 |||| || || |||| || || Sbjct 302 TTGGTATTGCGATTGCGCGGAGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412718453866175