Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq13424 102 6e-17 >seq13424 Length=872 Score = 102 bits (112), Expect = 6e-17 Identities = 163/232 (70%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 107580 ACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAA 107639 || || |||||||| ||| | ||| ||| || || || | | | | || ||| Sbjct 482 ACTGGTAAAACCATCACCTTGGAAGTCGAGTCTTCGGACACAATTGACAACGTCAAAGCC 423 Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699 |||||| ||||| ||||| | ||| || || ||| |||| || | ||| |||||| Sbjct 422 AAGATTCAGGATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCCGGTAAA 363 Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759 || |||||||| | |||| | || || |||||||| |||||||||||||| | || Sbjct 362 CAACTGGAGGATGGACGAACACTTGCTGATTACAACATCCAAAAGGAGTCTACTCTTCAT 303 Query 107760 ATGGTGTTGAGATTGCGAGGGGG--AAATAATA-AAAATATTTGTATTTAAA 107808 |||| ||| ||||||| || || | || ||| ||||| || ||| |||| Sbjct 302 TTGGTATTGCGATTGCGCGGAGGTCACATGATATAAAATGGTTTTATGTAAA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398757819413275