Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq13424 141 2e-28 >seq13424 Length=872 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| | ||| |||| || || || |||||||| || || || || || ||||||| Sbjct 279 ACCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGC 338 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||| || || || |||||||| || ||||||||||||| ||||| || || || Sbjct 339 AAGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGG 398 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||||||||| |||||||| ||||| || || ||||| || || || || || Sbjct 399 AATACCTTCCTTATCCTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGAC 458 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCA 82788 |||||| || || || || || |||| Sbjct 459 TTCCAAGGTGATGGTTTTACCAGTCA 484 Score = 129 bits (142), Expect = 1e-24 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652 ||||| || || | || || || ||||| ||||| || || ||||| | || | | | Sbjct 576 AAACGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCGAGTGTGCGA 635 Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 ||||| || ||||| |||||||||||||| | | |||||||||||| || || |||||| Sbjct 636 CCGTCCTCCAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGCGGGATACCTTCC 695 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || ||||| || || || ||||| ||||| || || | ||| ||||||| || Sbjct 696 TTGTCCTGAATTTTGGCCTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCCAGTGTG 755 Query 82773 ATCGTCTTGCCTGTCA 82788 || || ||||| |||| Sbjct 756 ATTGTTTTGCCAGTCA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981519312797025