Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq13424 95.1 1e-14 >seq13424 Length=872 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || || | ||| |||||||| | ||| ||||||||| ||||||||||| || Sbjct 280 CCTCCGCGCAATCGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCA 339 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || ||||| || ||||| ||||| || | ||||| ||||| | ||| Sbjct 340 AGTGTTCGTCCATCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGA 399 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||| ||| ||| || |||| |||| | | ||||| || || || Sbjct 400 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGAC 458 Query 35689 CTCCACCGTGATCGTTTTACCCGTCA 35714 |||| ||||| |||||||| |||| Sbjct 459 TTCCAAGGTGATGGTTTTACCAGTCA 484 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||||||||| | | ||| | ||| | || ||||| || ||||||||||| | Sbjct 565 TTCCACCACGTAAACGGAGCACAAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCCG 624 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || || |||| ||||| ||||| || ||||| ||||| || || || || | | Sbjct 625 CGAGTGTGCGACCGTCCTCCAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGCG 684 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | | ||||||||| ||| ||| | ||| | | | | | |||||| ||||| Sbjct 685 GGATACCTTCCTTGTCC-TGAATTTTGGCCTTGACATTGTCAATAGTGTCGGAGGATTCG 743 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCA 35714 || |||| ||||| ||||| || |||| Sbjct 744 ACTTCCAGTGTGATTGTTTTGCCAGTCA 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450655685333000