Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq13424 127 1e-24 >seq13424 Length=872 Score = 127 bits (140), Expect = 1e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551 ||||| |||||||| ||||| ||||||||| ||||| ||||| | ||||||||| | Sbjct 292 CGCAATACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGTCCA 351 Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611 || || ||||||||||||||||| |||| ||||||||||| || || | || ||||| Sbjct 352 TCCTCCAGTTGTTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGAATACCTTCCTTA 411 Query 34612 TCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670 || ||| || | ||| ||| | ||||||||| ||| ||||||| ||| || Sbjct 412 TC-CTGAATCTTGGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGACTTCCAAGGTGAT 470 Query 34671 CGTTTTACCGGT 34682 |||||||| || Sbjct 471 GGTTTTACCAGT 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314635719602675