Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq13424 87.8 1e-12 >seq13424 Length=872 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || |||||| |||| || || || || |||| |||||||| |||||| |||| Sbjct 413 GATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCCGGTAAACAACTGGAG 354 Query 27943 GACGAACGCAG-CTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 || | ||| | |||| | ||||||||||||||||| ||| ||| | |||||||| || Sbjct 353 GATGGACGAACACTTG-CTGATTACAACATCCAAAAGGAGTCTACTCTTCATTTGGTATT 295 Query 28002 GCGTTTGCGTGGCGG 28016 ||| ||||| || || Sbjct 294 GCGATTGCGCGGAGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355756250138325