Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017-
05-22] 24,475 sequences; 44,530,309 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq13424 111 4e-19
>seq13424
Length=872
Score = 111 bits (122), Expect = 4e-19
Identities = 135/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||||||||||||||| ||||||||||||||||| || | |||| ||||| || ||
Sbjct 303 ATGAAGAGTAGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGTCCATCCTCCAGTTG 362
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| ||||| ||||| || | ||| ||||| | | || |||||||| || ||||| ||
Sbjct 363 TTTACCGGCAAAGATTAGTCGCTGTTGGTCAGGGGGAATACCTTCCTTATCCTGAATCTT 422
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
|||||| | || | |||| ||| ||| ||||| | || || ||||| || ||
Sbjct 423 GGCTTTGACGTTGTCAATTGTGTCCGAAGACTCGACTTCCAAGGTGATGGTTTTACCAGT 482
Query 152081 GAGA 152084
|||
Sbjct 483 CAGA 486
Score = 84.2 bits (92), Expect = 5e-11
Identities = 136/194 (70%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| |||||||| || || || || || |||||||||||||| || | || | || ||
Sbjct 581 GAGCACAAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCCGCGAGTGTGCGACCGTC 640
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || || ||||| | | || || || | || ||| ||||||||
Sbjct 641 CTCCAGTTGCTTT--CCAGCAAAGATCAAACGTTGTTGATCTGGCGGGATACCTTCCTTG 698
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
|| |||||||| |||||| | || | |||| || || ||||| || || ||
Sbjct 699 TCCTGAATTTTGGCCTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCCAGTGTGATT 758
Query 152070 GTTTTGCCCGTGAG 152083
|||||||| || ||
Sbjct 759 GTTTTGCCAGTCAG 772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153458978022725
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |