Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq4231 96.9 4e-15 >seq4231 Length=3588 Score = 96.9 bits (106), Expect = 4e-15 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||||||||| ||||| || |||| ||||| | | |||||| || ||||||| Sbjct 1634 AATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCGCTGAATCTTTC 1575 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | || || ||||| || || ||||| ||||||||||||||| | || | ||| || Sbjct 1574 AATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCAAAGAAAGCTAAGACGTGTTTGAT 1515 Query 23952 AAAATGTCTTTCATCA--GTTGATAAT-TTTTTCCAATCATTAATATCTTTTGATAAATC 24008 || ||| | || ||| ||| | | || | |||||||| ||||| ||||| | ||| Sbjct 1514 GAAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCATGCATATCCTTTGAGAGATC 1455 Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 | || ||| |||||||||| ||| ||| |||||||| Sbjct 1454 GATCTCTTCAGCTGTCCAAAAGGAAGCCTCGGCTCGCTTATA 1413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521328457265000