Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq22609 86.0 8e-12 >seq22609 Length=3841 Score = 86.0 bits (94), Expect = 8e-12 Identities = 127/178 (71%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 155871 TTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAAC 155930 || ||||| || || || || ||||| || || || || || | | ||| || Sbjct 1814 TTCAAAATCTGTAGTCGACCACCCTCATCAGGCAAAGAGATCTCCATGTGAACTTCTAAT 1755 Query 155931 CGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATT 155990 || ||||||| ||| | |||||||||||| | ||| | | |||||||| || ||||| Sbjct 1754 CGACCAGGTCGTAAGAGTGCTTCGTCAATCATGTCTAGACGATTGGTCATTCCAATGATC 1695 Query 155991 AAAATGTTGTTTAAAGAT--TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || || ||||| ||| | ||||||||||| || ||||| | | ||||||||| || Sbjct 1694 AAGATATTGTT--AAGTTGATCTACACCGTCCATCTTAGAGAGAAGTTGATTGACAAC 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666871116681000