Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq18860 98.7 2e-15 >seq18860 Length=11993 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 281536 TCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTC 281595 ||| ||| || ||||| || | ||||||||| | || || | | | ||| ||||||| Sbjct 3645 TCAAGTTTTCAACGATATCCATCGGATTATAATTTGGTATATCTGAACTCCATCCGGTTC 3704 Query 281596 CAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTT 281655 |||| |||||||| |||||||| || | | || | | ||||||||| |||||||||| Sbjct 3705 CAATTCCACTTGATCCATTTACTAAGACCATAGGTAAGACAGGTACATACCATTCTGGTT 3764 Query 281656 CAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCT 281702 | |||| | | ||||| ||| ||| || || | | | ||||||| Sbjct 3765 CGATTTGAGCTCCATCGTCAGTCAAGTAATTTAAGACATGATCATCT 3811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057529092222170