Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq18860 98.7 2e-15
>seq18860
Length=11993
Score = 98.7 bits (108), Expect = 2e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 281536 TCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTC 281595
||| ||| || ||||| || | ||||||||| | || || | | | ||| |||||||
Sbjct 3645 TCAAGTTTTCAACGATATCCATCGGATTATAATTTGGTATATCTGAACTCCATCCGGTTC 3704
Query 281596 CAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTT 281655
|||| |||||||| |||||||| || | | || | | ||||||||| ||||||||||
Sbjct 3705 CAATTCCACTTGATCCATTTACTAAGACCATAGGTAAGACAGGTACATACCATTCTGGTT 3764
Query 281656 CAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCT 281702
| |||| | | ||||| ||| ||| || || | | | |||||||
Sbjct 3765 CGATTTGAGCTCCATCGTCAGTCAAGTAATTTAAGACATGATCATCT 3811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057529092222170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |