Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq21405 91.5 1e-13
>seq21405
Length=5690
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 101866 GACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925
||||||||| |||| || | ||||||||| || | |||| ||||| | || |
Sbjct 661 GACATAAAACTGACAAAACATATGACAAGGAGGAAGGGCCATCTTAGGTAAATCAGCTGG 602
Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985
||||||||||| || | ||||| | ||| ||||| | ||| || | ||||| |
Sbjct 601 ATTCCAAGCACTCAAGATGATCCTACGATCCGTAGGATGATGTTTGATTTTCTCAATACA 542
Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTT--ATATTCT 102043
| ||| ||||| || || |||| || ||||||| | || || ||| |
Sbjct 541 ATCTTTCAATTGATCGACCCCTTGACCGGTATAATCAT--CTTGGGCCGTTCGATAACAT 484
Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCT 102099
||||||||||||| ||| || |||||||| | ||||| | ||||||||| ||||
Sbjct 483 GCTCCGAAATGCCGCCATTGGAATCCATAGATCGGTCCTAAATCTCCTTCGGCTCT 428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361155400584509
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |