Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq21405 84.2 2e-11
>seq21405
Length=5690
Score = 84.2 bits (92), Expect = 2e-11
Identities = 165/237 (70%), Gaps = 8/237 (3%)
Strand=Plus/Minus
Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290
||||||||||||| || | |||||| || || | ||||| || || | ||| |
Sbjct 660 ACATAAAACTGACAAAACATATGACAAGGAGGAAGGGCCATCTTAGGTAAATCAGCTGGA 601
Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT-TGTGTGTATGGTATTAATT-- 97347
|||||||||| || | || || | ||| || || | ||| || || | | |||
Sbjct 600 TTCCAAGCACTCAAGATGATCCTACGATCCGTAGGATGATGTTTG-ATTTTCTCAATACA 542
Query 97348 ATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTT-GATATTC 97406
|||| || |||||||| || |||| || ||||| | ||| | | || ||||
Sbjct 541 ATCT--TTCAATTGATCGACCCCTTGACCGGTATAATCAT-CTTGGGCCGTTCGATAACA 485
Query 97407 TGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCT 97463
|||||| ||||||| ||||||||||||||| | ||||| | |||||||| ||||
Sbjct 484 TGCTCCGAAATGCCGCCATTGGAATCCATAGATCGGTCCTAAATCTCCTTCGGCTCT 428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346692037109630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |