Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq19309 86.0 7e-12 >seq19309 Length=20099 Score = 86.0 bits (94), Expect = 7e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 42953 TTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATC 43012 ||| ||||| | ||| ||||| ||||| || | || |||||||||||| |||||||| Sbjct 2210 TTGACCTCCACGTAATCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATC 2151 Query 43013 AGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGC 43072 || || || ||| |||| || | || ||||| || || || | |||||| ||||| | Sbjct 2150 GGCAAGTGTTCGCCCGTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGG 2091 Query 43073 CGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107 || | | ||||||||| ||| | || | ||||| Sbjct 2090 TGGGATACCTTCCTTGTCC-TGAATCTTGGCTTTGA 2056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571662072760520