Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 86.0 7e-12
>seq19309
Length=20099
Score = 86.0 bits (94), Expect = 7e-12
Identities = 114/156 (73%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 42953 TTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATC 43012
||| ||||| | ||| ||||| ||||| || | || |||||||||||| ||||||||
Sbjct 2210 TTGACCTCCACGTAATCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATC 2151
Query 43013 AGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGC 43072
|| || || ||| |||| || | || ||||| || || || | |||||| ||||| |
Sbjct 2150 GGCAAGTGTTCGCCCGTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGG 2091
Query 43073 CGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 43107
|| | | ||||||||| ||| | || | |||||
Sbjct 2090 TGGGATACCTTCCTTGTCC-TGAATCTTGGCTTTGA 2056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571662072760520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |