Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 84.2 2e-11
>seq19309
Length=20099
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
|||||| | |||| || ||||| || || || ||| |||||||| || ||||||
Sbjct 2207 ACCTCCACGTAATCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGC 2148
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| | ||| | || ||||||||||| |||||||| || || || || ||||| | ||
Sbjct 2147 AAGTGTTCGCCCGTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGGTGG 2088
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||| || || ||| || |||||| | ||| ||||| | | ||| ||
Sbjct 2087 GATACCTTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATTGTATCCGATGACTCGAC 2028
Query 44074 ATCGACCGTAATTGTTTTACCGGT 44097
|||| || || || ||||| ||
Sbjct 2027 TTCGAGGGTGATGGTCTTACCAGT 2004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354683517304332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |