Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq19418 104 4e-17
>seq19418
Length=20221
Score = 104 bits (114), Expect = 4e-17
Identities = 146/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 193968 TCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATC 194027
||||||||| |||| || ||||| || || ||||| || | || | || |||||
Sbjct 17362 TCTCCAAGACGAGGAAGAACGTTTGTGACACGCAAGATCACCCGAGCAGTGGCTGAGATC 17303
Query 194028 TCTGTTGGATTACAGAAGATT--CTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085
| || || || | || ||||||||||| || | ||| || || |||||||
Sbjct 17302 AGCTTAGGCTTGCA--ATCTTGCCTTTATCTTGGAAACTTGTCTGCCAAAAGAGATTGGG 17245
Query 194086 GACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATG 194145
| || || || ||||||||||||| |||||| |||||| ||||| |||| | | || |
Sbjct 17244 GTCATGCCAAAGATTATGTTGAAGGCATGTGGAGAATGTTACAACAAGATGCAGCAGAAG 17185
Query 194146 ATTATGTGATTGCTACAGGTGAA 194168
|||||||| | ||||| ||||||
Sbjct 17184 ATTATGTGTTAGCTACTGGTGAA 17162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807335555080040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |