Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 82.4 6e-11
>seq19309
Length=20099
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 115307 CTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA-GTAAA 115365
|| || || || ||||| ||| ||||| ||||| || || ||| |||| || ||
Sbjct 2001 CTGACTGGTAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTG-ACAATGTCAA 2059
Query 115366 ACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGG 115425
| || ||| || || ||||| |||| || || || || | || | ||| ||
Sbjct 2060 AGCCAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGCGATTAATCTTTGCAGG 2119
Query 115426 CAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTAT 115485
|||||||| ||||| | ||| | |||||||| ||||||||||| ||||||||| |
Sbjct 2120 TAAACAATTGGAAGACGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCT 2179
Query 115486 ACATATGGTGTTGAGATTGCGAGGAGG 115512
|| |||| ||| |||| || |||||
Sbjct 2180 TCACTTGGTCTTGCGATTACGTGGAGG 2206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425231203955080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |