Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq19309 82.4 6e-11 >seq19309 Length=20099 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 115307 CTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAA-GTAAA 115365 || || || || ||||| ||| ||||| ||||| || || ||| |||| || || Sbjct 2001 CTGACTGGTAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTG-ACAATGTCAA 2059 Query 115366 ACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGG 115425 | || ||| || || ||||| |||| || || || || | || | ||| || Sbjct 2060 AGCCAAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGCGATTAATCTTTGCAGG 2119 Query 115426 CAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTAT 115485 |||||||| ||||| | ||| | |||||||| ||||||||||| ||||||||| | Sbjct 2120 TAAACAATTGGAAGACGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCT 2179 Query 115486 ACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||| ||| |||| || ||||| Sbjct 2180 TCACTTGGTCTTGCGATTACGTGGAGG 2206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425231203955080