Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq4808 129 7e-25
>seq4808
Length=7665
Score = 129 bits (142), Expect = 7e-25
Identities = 163/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
||||||||| || ||||| ||||| ||||| | || || ||| | ||||| ||
Sbjct 5944 AATTTGGAAGCCATAGAAGCATCTGGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTC 5885
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
| | ||||| ||||| || ||||| || || ||||| ||||| || | ||| || ||
Sbjct 5884 AATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAAGACATGTTTGAT 5825
Query 93535 AAAATGTTTCTCATCATC-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATC 93591
||| |||||||||||||| || || | || ||||||||| | ||| || ||||||||
Sbjct 5824 AAAGTGTTTCTCATCATCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGATC 5765
Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633
|| ||||||| | ||||| || || || || ||| |||||
Sbjct 5764 GATTTCTTCGGCTGTCCAGAATGAAGCCTCGGCTCGCTTGTA 5723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556709340823160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |