Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq11006 98.7 2e-15 >seq11006 Length=23763 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 || || || || ||||||||||||||||| || || || | || |||||||| | Sbjct 2317 GGATCACTCTCCGGTGGTTGGAAGATGAAACTTGCTCTTGCCCGAGCCATTCTTTTCAAG 2258 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 |||||| || | ||||| |||||||| |||||||| |||| ||| || ||| Sbjct 2257 GCCGATATCTTGCTGCTCGATGAGCCTACCAACCATTTGGATGTGCTCAATGTTCAATGG 2198 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || || |||| | | ||| ||| | | | || |||| ||||||||||||||| Sbjct 2197 CTCATGGACTACTTGAAGTCTCTTGAGACTTGTACCTCAATCATCGTCTCTCACGACTCT 2138 Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACT 279915 |||||| | || ||| || | | ||||||||||| Sbjct 2137 GGCTTCTTGGACAACGTTTGTACCGACATCATTCACT 2101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027550252269319