Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq11006 98.7 2e-15
>seq11006
Length=23763
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
|| || || || ||||||||||||||||| || || || | || |||||||| |
Sbjct 2317 GGATCACTCTCCGGTGGTTGGAAGATGAAACTTGCTCTTGCCCGAGCCATTCTTTTCAAG 2258
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||||| || | ||||| |||||||| |||||||| |||| ||| || |||
Sbjct 2257 GCCGATATCTTGCTGCTCGATGAGCCTACCAACCATTTGGATGTGCTCAATGTTCAATGG 2198
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| || |||| | | ||| ||| | | | || |||| |||||||||||||||
Sbjct 2197 CTCATGGACTACTTGAAGTCTCTTGAGACTTGTACCTCAATCATCGTCTCTCACGACTCT 2138
Query 279879 GGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACT 279915
|||||| | || ||| || | | |||||||||||
Sbjct 2137 GGCTTCTTGGACAACGTTTGTACCGACATCATTCACT 2101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027550252269319
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |