Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq19309 102 6e-17 >seq19309 Length=20099 Score = 102 bits (112), Expect = 6e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||| ||| | || | ||||||| | || |||||||| || |||||||| ||| Sbjct 1207 GACAAAGAAGGTATTCCACCAGACCAACAACGTCTCATCTTTGCCGGAAAACAACTTGAA 1266 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | || ||||||||||||| |||||||||||||| ||||||||| ||||| | Sbjct 1267 GATGGACGCACCCTGGCCGATTACAACATTCAGAAGGAATCCACTCTTCATTTGGTACTC 1326 Query 22047 CGTTTACGAGGAGG 22060 ||| | || || || Sbjct 1327 CGTCTGCGTGGTGG 1340 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||||||| || | |||||||| || |||||| | ||||| ||| | ||||||| Sbjct 2095 ACCAACAGCGATTAATCTTTGCAGGTAAACAATTGGAAGACGGGCGAACACTTGCCGATT 2154 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| ||||| ||||| ||||||||||| |||| || || ||||| ||||| Sbjct 2155 ACAACATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGCGATTACGTGGAGG 2206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358029829667686