Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 129 1e-24
>seq19309
Length=20099
Score = 129 bits (142), Expect = 1e-24
Identities = 156/211 (74%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | || || ||||||| || ||| || |||||||| || || ||
Sbjct 1919 TCCACCACGTAGACGGAGCACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCAGC 1860
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| ||||| || ||||| | |||||| || || || |||||||| |||||| |||||
Sbjct 1859 GAGTGTGCGACCATCTTCCAGTTGTTTACCAGCAAAAATCAGACGTTGTTGA---TCTGG 1803
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || ||||| || ||||||||||| || || ||||| || || | ||| |||||
Sbjct 1802 GGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGATGATTC 1743
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|| || ||||| || || || ||||| |||
Sbjct 1742 GACCTCCAGCGTAATTGTTTTACCGGTAAGA 1712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179325527467602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |