Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq19309 129 1e-24 >seq19309 Length=20099 Score = 129 bits (142), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || ||||||| || ||| || |||||||| || || || Sbjct 1919 TCCACCACGTAGACGGAGCACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCAGC 1860 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| ||||| || ||||| | |||||| || || || |||||||| |||||| ||||| Sbjct 1859 GAGTGTGCGACCATCTTCCAGTTGTTTACCAGCAAAAATCAGACGTTGTTGA---TCTGG 1803 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || ||||| || ||||||||||| || || ||||| || || | ||| ||||| Sbjct 1802 GGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTGTCGATCGTGTCGGATGATTC 1743 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || || ||||| || || || ||||| ||| Sbjct 1742 GACCTCCAGCGTAATTGTTTTACCGGTAAGA 1712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179325527467602