Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9033 96.9 4e-15 >seq9033 Length=2832 Score = 96.9 bits (106), Expect = 4e-15 Identities = 313/481 (65%), Gaps = 14/481 (3%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 ||||||||| | || || ||||| || ||||| || ||| || || || | Sbjct 2505 CCACATATCGTATTGTAGTTCTCCTTGACTAGCGGGCGAACCAGGAAACGTTTCATACGC 2446 Query 114163 GCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 ||| ||| || | || | ||| ||| || || || |||||||| || | |||||| Sbjct 2445 GCCTTCAGCCACGGCAAGCTCGTTTGAG---GCTTCAAGCGCTGCGTGGTAAAGTGTCTC 2389 Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT 114279 || || | ||||||| | |||||| || || || || | || | || | | Sbjct 2388 GAAGATCTGGGCATTCAATTTCTTGGCTTCCGGTGAGTCGAATGGAAG-CTTCAAGATGT 2330 Query 114280 -AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338 |||| |||| || | || || |||| ||||| || ||||||||||| || |||| Sbjct 2329 GAAATGCATCTGCCAATCCGGATACTCCGATTCCAATGGGACGATGTCTCATGTTGGACT 2270 Query 114339 TTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 114398 || ||| | ||||| || ||||| ||| || | | ||| | || || | Sbjct 2269 TTTTAGCTTCCGGAACGGGGTAGTAATTCACATCAATTATACGATTCAAGTTCCACGTAA 2210 Query 114399 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 114458 | |||| || | ||| || ||||||| | || || | || || | || ||| || Sbjct 2209 CTTCCTTCGTCACTTCGTGCAGCTTTTGGAAAGCATA-----GACTC-CATCGGTGATAT 2156 Query 114459 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 114518 || | || || ||||| || ||||| |||| || | |||||| | | |||| Sbjct 2155 ACGTCGGCAGCGCGATCGAGGCCAGGCTACAGACCGCCACCTCATCTGGGGCTGAATACT 2096 Query 114519 CTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 114578 | || || || ||||||| || || ||| |||||||| | |||||||||||| || | Sbjct 2095 CCATGATCTCAGTACACAGGTTCGATGACTTGATGGTGCCAAGGTTCTTTTGATTCGATT 2036 Query 114579 T 114579 | Sbjct 2035 T 2035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597191127287720