Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 91.5 2e-13
>seq19309
Length=20099
Score = 91.5 bits (100), Expect = 2e-13
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039
||||||| | ||| ||||| ||||| || | || |||||||||||| |||||||| |
Sbjct 2208 GACCTCCACGTAATCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGG 2149
Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099
| || || ||| |||| || | || ||||| || || || | |||||| ||||| | ||
Sbjct 2148 CAAGTGTTCGCCCGTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGGTG 2089
Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTG-TTTGA 42132
| | | ||||||||| ||| | || | |||||
Sbjct 2088 GGATACCTTCCTTGTCC-TGAATCTTGGCTTTGA 2056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543065052908560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |