Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq19309 113 4e-20 >seq19309 Length=20099 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | | ||| ||||| || ||||||||||| |||||||| ||||| Sbjct 1921 ATTCCACCACGTAGACGGAGCACAAGATGAAGAGTTGATTCCTTCTGGATATTGTAATCA 1862 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| |||| |||||| || || | |||| ||||| || || || Sbjct 1861 GCGAGTGTGCGACCATCTTCCAGTTGTTTACCAGCAAAAATCAGACGTTGTTGATCTGGG 1802 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || || ||||| |||| || | || | |||||||| || || Sbjct 1801 GGAATGCCTTCCTTGTCCTGGATTTTGGCCTTGA-CGTTGTCGATCGTGTCGGATGATTC 1743 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGA 45320 ||| || || |||| ||||| ||||| ||| Sbjct 1742 GACCTCCAGCGTAATTGTTTTACCGGTAAGA 1712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451880260779640