Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq18860 102 1e-16
>seq18860
Length=11993
Score = 102 bits (112), Expect = 1e-16
Identities = 179/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 168337 TTTCCTTGTTGAAGTCCCAAAATTTTCTTGAGATCATTGAACTCCTGATTAGATGTCAAC 168396
|| |||||||||||||||| ||||||||||| | | || ||| ||| | | |||
Sbjct 10561 TTGCCTTGTTGAAGTCCCATAATTTTCTTGATGTGTTGGATCTCAGCATTCGCTAACAAT 10620
Query 168397 TG--TGCCACCGATGAGTCCCTCACGTTTTTACACTTACCACGGAGTGGAAATACCCCAT 168454
|| | |||| | | || | |||||| || ||||| ||||| || || ||||
Sbjct 10621 TGACTTCCACTG--GCTTCTCGAACGTTTAGTAGTTTTCCACGAAGTGGGAAAACACCAT 10678
Query 168455 AATGATCTCTACCCACGACGGAGAGACCAGCGACAGCGAGAGTTTTCGCTGAATCACCCT 168514
||| ||| | || | ||| || | ||||| ||||| | | ||| |||||||| || |
Sbjct 10679 AATTATCACGTCCGATGACCGATAATCCAGCAACAGCCAAGGATTTGGCTGAATCTCCTT 10738
Query 168515 CTGTCACGATGAGTGTACACTTTCCAGACTGTGCCGTACCAGCTTTGTTCGCATCGTCCA 168574
| || | |||||| ||||| | | | | | || || || || || ||||| ||||
Sbjct 10739 CCGTTAAGATGAGAGTACAATCTGCTGCTTTCTTGGTCCCTGCGTTATTGGCATCTTCCA 10798
Query 168575 ATTTGGGGATACCAGTGAT 168593
||||| |||||| |||||
Sbjct 10799 ATTTGACGATACCGGTGAT 10817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588815805890200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |