Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq20711 132 6e-26
>seq20711
Length=12910
Score = 132 bits (146), Expect = 6e-26
Identities = 132/171 (77%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 153258 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 153317
|||||||| || ||| ||||||||| ||||||||||||||| |||| || |||||
Sbjct 6957 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTATCAGCCTGAAATCTCTCAA 7016
Query 153318 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCA 153377
|| |||||||| |||| |||| ||||| ||| | |||| || ||||| ||||||
Sbjct 7017 GGCAGATTGGAGTCTTTGATCAACTACCAGACGATGATCAGCTCGCTCACAGGCTTACCA 7076
Query 153378 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|| | || ||||| ||||||| ||||||||||| || || ||||| |||
Sbjct 7077 ATTTCTAATGCATCATTATTAGACGAAGCAACTGCTGCCGCTGAAGCCATG 7127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579055261358560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |