Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq20711 129 7e-25 >seq20711 Length=12910 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 157933 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 157992 |||||||| || ||| ||||||||| ||||||||||||||| |||| || ||||| Sbjct 6957 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTATCAGCCTGAAATCTCTCAA 7016 Query 157993 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCG 158052 || |||||||| |||| |||| ||||| ||| | |||| |||||||| |||| Sbjct 7017 GGCAGATTGGAGTCTTTGATCAACTACCAGACGATGATCAGCTCGCTCACAGGCTTACCA 7076 Query 158053 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || | || ||||| ||||||| ||||||||||| || || ||||| ||| Sbjct 7077 ATTTCTAATGCATCATTATTAGACGAAGCAACTGCTGCCGCTGAAGCCATG 7127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587891257424240