Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq18860 87.8 2e-12
>seq18860
Length=11993
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755
|||||||| || |||||| | |||||| ||| ||||| | | |||| | ||||| |||
Sbjct 9733 ATTAAAGTAGCTCAGTTGGGAGGTTACTGTGCCGAACATTCAGCTTATCATCACGGAGAA 9674
Query 98756 CAAAACCTTTGTGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATATA 98815
|| | ||| |||| || | |||| ||| | ||||| || | ||||||||
Sbjct 9673 CAGAGTCTTACGCAAACGATTGTCGCCCTTGCTCAAAACTTTGTCGGAAGCAATAATATC 9614
Query 98816 ACACTACTTGAGCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATTCGGCT 98875
| ||||| || |||| || || ||||| ||| | || ||||||||| | ||
Sbjct 9613 AATGTACTTTCACCTAATGGGCAATTCGGTACAAGAGCGAATGGTGGTAAAGATGCAGCC 9554
Query 98876 GCATCAAGGTATATTTATACCAA 98898
| |||||||||||| ||||||
Sbjct 9553 TCTGCAAGGTATATTTTTACCAA 9531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658224122559640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |