Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq18860 87.8 2e-12 >seq18860 Length=11993 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 98696 ATTAAAGTTGCCCAGTTGAGTGGTTACATTGCGGAACAAACTGATTATAAACACGGTGAA 98755 |||||||| || |||||| | |||||| ||| ||||| | | |||| | ||||| ||| Sbjct 9733 ATTAAAGTAGCTCAGTTGGGAGGTTACTGTGCCGAACATTCAGCTTATCATCACGGAGAA 9674 Query 98756 CAAAACCTTTGTGAAACAATAATAAAATTTGCACAAGATTTTGTGGGTACAAATAATATA 98815 || | ||| |||| || | |||| ||| | ||||| || | |||||||| Sbjct 9673 CAGAGTCTTACGCAAACGATTGTCGCCCTTGCTCAAAACTTTGTCGGAAGCAATAATATC 9614 Query 98816 ACACTACTTGAGCCAGATGGTCAGTTTGGTACCAGACTTGAAGGAGGTAAAGATTCGGCT 98875 | ||||| || |||| || || ||||| ||| | || ||||||||| | || Sbjct 9613 AATGTACTTTCACCTAATGGGCAATTCGGTACAAGAGCGAATGGTGGTAAAGATGCAGCC 9554 Query 98876 GCATCAAGGTATATTTATACCAA 98898 | |||||||||||| |||||| Sbjct 9553 TCTGCAAGGTATATTTTTACCAA 9531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658224122559640