Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq19309 86.0 5e-12 >seq19309 Length=20099 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| |||||| ||||| ||||| |||| ||| ||||| |||| || Sbjct 1614 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCAGCGAGAGTTCGACCGTCTTCA 1555 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||| || ||||| || || || |||||||| | || | ||||||||||| | Sbjct 1554 AGTTGCTTTCCTGCAAAGATAAGACGTTGTTGATCAGGAGGGATACCCTCCTTGTCTTGA 1495 Query 48678 ATCTT 48682 ||||| Sbjct 1494 ATCTT 1490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380836579991157