Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 100 2e-16
>seq19309
Length=20099
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 28578 ACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTGGCCGATCTCAA-GCA 28636
|| ||||| ||||| ||| |||| || | || || || | | | || |||| ||
Sbjct 2004 ACTGGTAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTGACAATGTCAAAGCC 2063
Query 28637 AAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAA 28696
|| | || ||||| || || | || ||| |||||| || | |||||||| || ||
Sbjct 2064 AAGATTCAG-GACAAGGAAGGTATCCCACCAGACCAACAGCGATTAATCTTTGCAGGTAA 2122
Query 28697 ACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCA 28756
|||||||||||| ||| | |||||||| ||||||||||| || |||||||| ||
Sbjct 2123 ACAATTGGAAGACGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCTTCA 2182
Query 28757 CATGGTATTAAGATTACGAGGAGG 28780
| |||| || ||||||| |||||
Sbjct 2183 CTTGGTCTTGCGATTACGTGGAGG 2206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425291987831661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |