Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq20711 129 7e-25
>seq20711
Length=12910
Score = 129 bits (142), Expect = 7e-25
Identities = 131/171 (77%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || || || ||||||||||| ||||||| ||||| || | |||||||| ||
Sbjct 7127 CATGGCTTCAGCGGCAGCAGTTGCTTCGTCTAATAATGATGCATTAGAAATTGGTAAGCC 7068
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
||| || |||| | ||| ||||| |||| |||| |||||||| || ||||| ||
Sbjct 7067 TGTGAGCGAGCTGATCATCGTCTGGTAGTTGATCAAAGACTCCAATCTGCCTTGAGAGAT 7008
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAAC 140029
|||| ||||||||||||||| ||||||||| ||| || ||||||||
Sbjct 7007 TTCAGGCTGATAGGGAGTGTAACTCGTGTACCAAGCAGGGTTTTCAAGAAC 6957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578840919672680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |