Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq20711 129 7e-25 >seq20711 Length=12910 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||||||||| ||||||| ||||| || | |||||||| || Sbjct 7127 CATGGCTTCAGCGGCAGCAGTTGCTTCGTCTAATAATGATGCATTAGAAATTGGTAAGCC 7068 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || |||| | ||| ||||| |||| |||| |||||||| || ||||| || Sbjct 7067 TGTGAGCGAGCTGATCATCGTCTGGTAGTTGATCAAAGACTCCAATCTGCCTTGAGAGAT 7008 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAAC 140029 |||| ||||||||||||||| ||||||||| ||| || |||||||| Sbjct 7007 TTCAGGCTGATAGGGAGTGTAACTCGTGTACCAAGCAGGGTTTTCAAGAAC 6957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578840919672680