Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 122 2e-22
>seq19309
Length=20099
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 171854 TCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTC 171913
||| || || || || | ||||| ||| || ||| || ||||| | | | ||| |
Sbjct 2195 TCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGCAAGTGTTCGCCC 2136
Query 171914 GTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTT 171973
||| |||||||||||||| ||||| ||||||| ||||||||| ||||| || ||||| ||
Sbjct 2135 GTCTTCCAATTGTTTACCTGCAAAGATTAATCGCTGTTGGTCTGGTGGGATACCTTCCTT 2076
Query 171974 ATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAAT 172033
|| || || || ||| ||||| || ||||| || || || ||||| || || ||
Sbjct 2075 GTCCTGAATCTTGGCTTTGACATTGTCAATTGTATCCGATGACTCGACTTCGAGGGTGAT 2016
Query 172034 GGTTTTACCAGT 172045
||| ||||||||
Sbjct 2015 GGTCTTACCAGT 2004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904889814322200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |