Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq14910 86.0 8e-12 seq14909 86.0 8e-12 >seq14910 Length=9531 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 194239 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTAT 194297 |||||||||| || ||||| ||| || || |||| || |||||||| ||| || Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGA-CAGAAAGGAACCGTTGGAAT 4754 Query 194298 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 194357 | ||| ||||||||||||||||||||| || ||| || |||||||||||||| Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814 Query 194358 CAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 ||||| || ||||| || ||||||| ||| Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848 >seq14909 Length=9444 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 194239 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTAT 194297 |||||||||| || ||||| ||| || || |||| || |||||||| ||| || Sbjct 4696 ATACCTGAAACGGGAGATAAGTTTGCATCAAGACATGGA-CAGAAAGGAACCGTTGGAAT 4754 Query 194298 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 194357 | ||| ||||||||||||||||||||| || ||| || |||||||||||||| Sbjct 4755 CTTATATAGACAAGAAGATATGCCATTTACCTCTGAAGGGATTTGTCCAGATATTATTAT 4814 Query 194358 CAATCCAAATTGTATTCCGTCCAGAATGACCATT 194391 ||||| || ||||| || ||||||| ||| Sbjct 4815 TAATCCTCATGCGATTCCATCTCGAATGACGATT 4848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632317570734920