Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq19309 82.4 6e-11
>seq19309
Length=20099
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 107580 ACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAA 107639
|| || || ||||| ||| ||||| ||| | ||||| | | | | || |||
Sbjct 2004 ACTGGTAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTGACAATGTCAAAGCC 2063
Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699
|||||| || || ||||| | || || || ||| || | || | ||| ||||||
Sbjct 2064 AAGATTCAGGACAAGGAAGGTATCCCACCAGACCAACAGCGATTAATCTTTGCAGGTAAA 2123
Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759
|| |||| |||| |||| | || || ||||||||||||||||||||||| | |||
Sbjct 2124 CAATTGGAAGACGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCTTCAC 2183
Query 107760 ATGGTGTTGAGATTGCGAGGGGG 107782
|||| ||| |||| || || ||
Sbjct 2184 TTGGTCTTGCGATTACGTGGAGG 2206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398771022733951
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |